Research Article |
Corresponding author: Vivien Cosandey ( vivien.cosandey@bluewin.ch ) Academic editor: Marco Moretti
© 2022 Vivien Cosandey, Olivier Broennimann, Antoine Guisan.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Cosandey V, Broennimann O, Guisan A (2022) Modeling the distribution of coprophagous beetle species in the Western Swiss Alps. Alpine Entomology 6: 25-38. https://doi.org/10.3897/alpento.6.83730
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Coprophagous beetles are essential for fecal matter removal and are thus considered key ecosystem services providers. Yet, our knowledge of these beetles’ distribution and ecology remains very limited. Here, we used Species Distribution Models (SDM) to investigate the species-environment relationships (i.e. their niche) and predict the geographic distribution of coprophagous beetles in the Western Swiss Alps. We used our own sampled data and existing national data from the Swiss faunal database to calibrate, for each species, a regional and a national SDM respectively. In both models, the best predictors were temperature and rock cover proportion, while a soil characteristic (∂13C) indicating its organic content and texture was important in the regional models and precipitations in the Swiss models. The model performed better for species specialized on low or high altitudes than for generalist species occurring in a large altitudinal range. The model performances were neither influenced by the size, nor by the nesting behavior (laying eggs inside or below the excrements) of the species. We also showed that species richness decreased with altitude. This study opens new perspective for a better knowledge of coprophagous beetle’s ecology and a useful tool for their conservation in mountain regions.
Dung beetles, Species distribution modeling (SDM), Ensemble of Small Models (ESMs), Hydrophilidae, Geotrupidae, Scarabaeidae
Coprophagous beetles are part of a specialized entomofauna feeding on the droppings of mammals (Hanski 2016). Some taxa have coprophagous adults and predaceous larvae, which are chasing fly larvae from dung patches (Hydrophilidae, Sphaeridinae), while other have coprophagous adults and larvae. In the latter case, some species lay their eggs directly in the dung (non-nesters: Scarabaeidae, Aphodiinae) and other dig simple wells or sophisticated network of tunnels and rooms where they stock dung and lay their eggs (paracoprids: Geotrupidae and Scarabaeidae, Scarabeinae) as a strategy to avoid the harsh intra- and inter-specific competition to exploit dung patches before they dry (Hanski 2016). By feeding on excrements and burying it, coprophagous beetles are essential for dung decomposition (Gittings et al. 1994). They avoid the accumulation of excrements, preventing pasture surface loss (
The study of the realized environmental niche of species, adaptation to local conditions and interspecific interactions (
The aim of this study was to bring a better understanding of the factors influencing the distribution of coprophagous beetle species in temperate mountain environments using a SDM approach. In order to obtain a sufficient number of accurate species data to quantify species-environment relationships, we sampled coprophagous beetles throughout the Western Swiss Alps in a random stratified manner. We additionally obtained all the occurrences available in Switzerland for the beetles of interest (Hydrophilidae, Geotrupidae and Scarabaeidae) from the Swiss national database (www.cscf.ch). This allowed us to compare fine-scale models calibrated in the study area using our precisely sampled data (regional model) and large-scale models calibrated at the Swiss level using national occurrences and our data (Swiss model). We expected the latter to reduce the risk, while calibrating the SDMs, of truncating the species’ environmental niche, which can happen when the complete extent of the species’ geographic distributions and environmental requirements are not covered in an analysis (
The study was conducted in Western Switzerland, in the alpine region of the Canton of Vaud, which goes from Vevey to Bex and to Rougemont (Fig.
From the 31 of May to the 12 September 2020, we collected beetles in 132 sampling plots (Fig.
Map of the study area situated in the alpine region of the Canton of Vaud above 1000 meters above sea level (dashed line) with three of its the major localities: Bex (B), Rougemont (R) and Vevey (V). The 132 plots where coprophagous beetles were sampled in 2020 are represented by the green circles.
We choose to perform active sampling over trapping in order to minimize the logistics and maximize the number of sampling stations. Each plot was sampled once. There, 20 minutes were dedicated to the manual search of beetles inside of the dung using a little shovel with the goal to catch the maximum number of species. We identified the collected beetles with the help of a binocular and based on identification keys found in the specialized literature (
In addition to our sampling dataset, we received all the Swiss data (26'602 occurrences from museums and private collections) from the Swiss database (info fauna-CSCF; www.cscf.ch) for the species of coprophagous beetles we found during our sampling. For the statistical analyses, we discarded the duplicated occurrences and the imprecise old museum data (geographic accuracy of less than 250 meters) ending with a 5359 occurrences dataset (20.15% of all occurrences).
To depict the species’ niche and to fit our models, we used 13 predictors (Table
The 13 predictors used in our models. For each of the variables, we provide its category, name, a short description and the model in which it was used: Swiss and/or regional.
Category | Name | Description |
---|---|---|
Swiss models | ||
Bioclim | Bio10 | Mean temperature of the warmest year quarter in a 250 meter focal window |
Bioclim | Bio16 | Mean precipitation in the wettest year quarter in a 250 meter focal window |
Bioclim | Bio17 | Mean precipitation of the driest quarter of the year in a 250 meter focal window |
Land use | Alpine pastures | Proportion of alpine pastures (situated above the permanent habitation area) area in a 250 meter focal window |
Land use | Cultivations | Proportion of cultivated area in a 250 meter focal window |
Land use | Forest edges | Proportion of forest edges area in a 250 meter focal window |
Land use | Human infrastructures | Proportion of human infrastructures cover in a 250 meter focal window |
Land use | Humid habitats | Proportion of humid habitats area in a 250 meter focal window |
Land use | Lowland pastures | Proportion of lowland pastures (situated in the permanent habitation area) area in a 250 meter focal window |
Land use | Rock | Proportion of rocks and bare soils area in a 250 meter focal window |
Regional models | ||
Bioclim | Solar radiation | Sum of the total radiation over one year |
Soil | C13 | Predicted carbon isotope composition ∂13C of the soil in the study region |
Soil | pH | Predicted soil pH in the study region |
For all species recorded at least 15 times in our sampling (Table
Species of coprophagous beetles found in the study area. For the 47 species, we report the family, the subfamily, the number of occurrences in the study area (in brackets for species with less than 15 occurrences, for which no regional models were run) and the number of all existing precise occurrences in Switzerland (in brackets for species, with less than 15 occurrences), the nesting behavior (N – Non-nesters, P – Paracoprids, H – Hydrophilidae [predatory larvae, no nesting]) and the mean size in mm. The species are depicted in Suppl. material
Family | Subfamily | Species | Occurrences in the study area | Occurrences in Switzerland | Nesting behavior | Size [mm] |
---|---|---|---|---|---|---|
Geotrupidae | Geotrupinae | Anoplotrupes stercorosus (Scriba, 1791) | 26 | 326 | P | 15.5 |
Geotrupidae | Geotrupinae | Geotrupes spiniger (Marsham, 1802) | (9) | 77 | P | 22 |
Geotrupidae | Geotrupinae | Geotrupes stercorarius (Linnaeus, 1758) | 17 | 76 | P | 20.5 |
Geotrupidae | Geotrupinae | Trypocopris vernalis (Linnaeus, 1758) | (2) | 67 | P | 11 |
Hydrophilidae | Sphaeridiinae | Cercyon haemorrhoidalis (Fabricius, 1775) | (8) | 90 | H | 2.8 |
Hydrophilidae | Sphaeridiinae | Cercyon impressus (Sturm, 1807) | 88 | 206 | H | 3.15 |
Hydrophilidae | Sphaeridiinae | Cercyon lateralis (Marsham, 1802) | 70 | 140 | H | 2.75 |
Hydrophilidae | Sphaeridiinae | Cercyon melanocephalus (Linnaeus, 1758) | 23 | 81 | H | 2.6 |
Hydrophilidae | Sphaeridiinae | Cercyon obsoletus (Gyllenhall, 1808) | (4) | 15 | H | 3.6 |
Hydrophilidae | Sphaeridiinae | Cercyon pygmaeus (Illiger, 1801) | 46 | 110 | H | 1.45 |
Hydrophilidae | Sphaeridiinae | Cercyon quisquilius (Linnaeus, 1761) | (7) | 6 | H | 2.25 |
Hydrophilidae | Sphaeridiinae | Cryptopleurum crenatum (Kugelann, 1794) | (8) | 16 | H | 2 |
Hydrophilidae | Sphaeridiinae | Cryptopleurum minutum (Fabricius, 1775) | 17 | 73 | H | 2 |
Hydrophilidae | Sphaeridiinae | Megasternum concinnum (Marsham, 1802) | (1) | 55 | H | 1.95 |
Hydrophilidae | Sphaeridiinae | Sphaeridium bipustulatum Fabricius, 1781 | 17 | 97 | H | 4.35 |
Hydrophilidae | Sphaeridiinae | Sphaeridium lunatum Fabricius, 1792 | 78 | 188 | H | 5.65 |
Hydrophilidae | Sphaeridiinae | Sphaeridium marginatum Fabricius, 1787 | (5) | 24 | H | 4.55 |
Hydrophilidae | Sphaeridiinae | Sphaeridium scarabaeoides (Linnaeus, 1758) | 80 | 228 | H | 5.75 |
Scarabaeidae | Aphodiinae | Acrossus depressus (Kugelann, 1792) | 76 | 268 | N | 7.5 |
Scarabaeidae | Aphodiinae | Acrossus rufipes (Linnaeus, 1758) | 62 | 242 | P | 12 |
Scarabaeidae | Aphodiinae | Agoliinus satyrus (Reitter, 1892) | (2) | 24 | N | 6 |
Scarabaeidae | Aphodiinae | Agrlilinus convexus (Erichson, 1848) | (12) | 77 | N | 5 |
Scarabaeidae | Aphodiinae | Amidorus obscurus s.l. (Fabricius, 1792) | 42 | 129 | N | 7 |
Scarabaeidae | Aphodiinae | Ammoecius brevis (Erichson, 1848) | (1) | 18 | N | 4 |
Scarabaeidae | Aphodiinae | Aphodius fimetarius aggr. (Linnaeus, 1758) | 16 | 231 | N | 6.5 |
Scarabaeidae | Aphodiinae | Bodilopsis rufa (Moll, 1782) | 59 | 217 | P | 6 |
Scarabaeidae | Aphodiinae | Calamosternus granarius (Linnaeus, 1767) | (8) | 249 | N | 4 |
Scarabaeidae | Aphodiinae | Colobopterus erraticus (Linnaeus, 1758) | 82 | 207 | P | 6 |
Scarabaeidae | Aphodiinae | Esymus pusillus (Herbst, 1789) | 20 | 130 | N | 4 |
Scarabaeidae | Aphodiinae | Euheptaulacus carinatus (Germar, 1824) | (10) | 25 | N | 5 |
Scarabaeidae | Aphodiinae | Nimbus contaminatus (Herbst, 1783) | (3) | 61 | N | 6 |
Scarabaeidae | Aphodiinae | Oromus alpinus (Scopoli, 1763) | 27 | 133 | N | 5.5 |
Scarabaeidae | Aphodiinae | Otophorus haemorrhoidalis (Linnaeus, 1758) | 47 | 156 | N | 4.5 |
Scarabaeidae | Aphodiinae | Parammoecius gibbus (Germar, 1816) | 21 | 50 | N | 3.75 |
Scarabaeidae | Aphodiinae | Planolinoides borealis (Gyllenhal, 1827) | (4) | (9) | N | 4.5 |
Scarabaeidae | Aphodiinae | Planolinus fasciatus (A. G. Olivier, 1789) | (4) | 21 | N | 4.5 |
Scarabaeidae | Aphodiinae | Rhodaphodius foetens (Fabricius, 1787) | (4) | 21 | N | 7.5 |
Scarabaeidae | Aphodiinae | Teuchestes fossor (Linnaeus, 1758) | 64 | 203 | P | 10.5 |
Scarabaeidae | Aphodiinae | Volinus sticticus (Panzer, 1798) | (5) | 141 | N | 4.5 |
Scarabaeidae | Scarabaeinae | Copris lunaris (Linnaeus, 1758) | (1) | 72 | P | 17.5 |
Scarabaeidae | Scarabaeinae | Euoniticellus fulvus (Goeze, 1777) | (5) | 55 | P | 9 |
Scarabaeidae | Scarabaeinae | Onthophagus baraudi Nicolas, 1964 | 16 | 27 | P | 5.5 |
Scarabaeidae | Scarabaeinae | Onthophagus coenobita (Herbst, 1783) | (3) | 123 | P | 8 |
Scarabaeidae | Scarabaeinae | Onthophagus fracticornis (Preyssler, 1790) | 58 | 315 | P | 8.5 |
Scarabaeidae | Scarabaeinae | Onthophagus illyricus (Scopoli, 1763) | (6) | 64 | P | 8.75 |
Scarabaeidae | Scarabaeinae | Onthophagus joannae Goljan, 1953 | (10) | 128 | P | 5 |
Scarabaeidae | Scarabaeinae | Onthophagus verticicornis (Laicharting, 1781) | (1) | 19 | P | 8 |
All the statistical analyses were performed with R Studio version 1.0.153. (R core team, 2017). The models were built using the biomod2 (
For each species found at least 15 times (
We calibrated all our models using two techniques (
We tried to explain the performance differences between single species models with species characteristics such as the standard deviation of the altitudinal amplitude (i.e. difference between highest and lowest altitude where the species were recorded in Switzerland), the influence of the three different nesting behavior (species with coprophagous larvae: non-nesters and paracoprids; species with predaceous larvae: Hydrophilidae) and the body size of the beetles (according to the specialized literature;
We summed all species’ maps of environmental suitability (as proposed by
During our sampling, we recorded 1120 occurrences of coprophagous beetles belonging to 48 species. We pooled the data of A. immaturus (20 occurrences) and A. obscurus (38 occurrences) together (see remark in the material and methods section) and considered for the statistical analyses 47 species (Table
Only one of the 47 species that we recorded in the study region had less than 15 occurrences at the Swiss level (Planolinoides borealis; Table
Results of the Ensemble of Small Models (ESMs) ordered by increasing median of max True Skills Statistics (maxTSS), calibrated (A) at the Swiss scale (46 species treated) and (B) at the Regional scale (23 species treated). The boxplots are colored according to the nesting behavior of the species (N – Non-nesters, P – Paracoprids, H – Hydrophilidae [predatory larvae, no nesting]). All the model projections are presented in Suppl. material
Relative importance of the variables used as predictors in the Ensemble of Small Models (ESMs) presented in increasing order of importance, for (A) the 46 models calibrated at the Swiss scale and (B) the 23 models calibrated at the Regional scale. For the full descriptions of the predictors, see Table
On the 47 species recorded in the study area, 23 had enough occurrences (at least 15) to build ESMs. The regional models showed a high heterogeneity in their performances going from a median maxTSS of 0.40 (Acrossus rufipes) and 0.85 (Parammoecius gibbus) (Fig.
We tested the influence of species’ biological traits on the performances of the Swiss models. The altitudinal range of the species had a significant influence on the median maxTSS in the models (GLM result: p-value = 1.78×10-10, t-value = -8.42; Fig.
Model performances in relation to species characteristics. The median max True Skills Statistics (maxTSS) of each species are plotted (A) against the altitudinal amplitude standard deviation of the species in Switzerland; (B) according to the nesting behavior of the species (N – Non-nesters, P – Paracoprids, H – Hydrophilidae [predatory larvae, no nesting]); (C) against the species size. The grey area represents the confidence interval 95%.
The sum of the environmental suitability resulting of our Swiss models predicted a global decrease in species richness from the low to the high altitudes (min = 11.45, max = 24.59 species) (Fig.
Expected species richness, based on the index of cumulated species suitability, in the Swiss Western Alps study area starting at 1000 meters above sea level according to the stacking of regional models considering (A) all species, (B) the Paracoprids, (C) the Non-nesters and (D) the Hydrophilidae.
We investigated the influence of various factors on the distributions of single coprophagous beetle species in the Western Swiss Alps using correlative species distribution modeling (SDM) approaches based on quantifying habitat suitability (
Our ESMs had very variable predictive performances as measured by the maximized TSS (see Jimenez-Valverde 2014;
When looking at the expected species richness of the coprophagous beetle communities based on the stacking of single species environmental suitability values over the study region, the global trend shows a diminution of the number of species with increasing altitude (Fig.
Many of the studies focusing on the coprophagous fauna use dung-baited trap to get an exhaustive species list in addition to data on the phenology and abundance (see for example
From a faunistical point of view, our study brings valuable new records for beetles, an under-sampled taxon in comparison to other insect groups such as orthopterans, butterflies, and even more vertebrates (Troudet et al. 2017), with the perspective to improve predictions of global change impact on biodiversity in mountain areas (
We particularly thank: Yannick Chittaro and Andreas Sanchez for their advises in entomology, for providing us the Swiss occurrences dataset and for their comments on the manuscript; Tatiana Zingre for her help during the field sampling; Paul Béziers, Robin Séchaud and the reviewers for their constructive remarks on the manuscript, which permitted to improve it substantially. Finally, we thank the researchers/curators of the Natural History Museum of Geneva, Giulio Cuccodoro, Bernard Landry and Emmanuel Toussaint for providing the photographic material. AG received support from the Federal Office of the Environment through the ValPar.CH project.
Figure S1
Data type: pdf file
Explanation note: Map of all the 46 species for which a model was run at the Swiss scale. The environmental suitability of each species is projected in the study area above 1000 meters above sea level (represented by a dashed line).
Figure S2
Data type: pdf file
Explanation note: Map of the 23 species for which a model was run at the Regional scale. The environmental suitability of each species is projected in the study area above 1000 meters above sea level (represented by a dashed line).
Figure S3
Data type: pdf file
Explanation note: Illustration of all the coprophagous beetle species found in the study region. Illustration: Vivien Cosandey.